Table 1 The genomes used to benchmark the performance of the algorithms
From: Fast parallel construction of variable-length Markov chains
Organism | GenBank identifier | Sequence length (bp) | GC % |
|---|---|---|---|
Pandoravirus salinus | NC_022098.1 | 2,473,870 | 61.72 |
Sorangium cellulosum | GCF_004135735.1 | 11,261,481 | 72.58 |
Drosophila melanogaster (Fruit fly) | GCA_004798055.1 | 133,403,897 | 42.12 |
Oryza sativa (Rice) | GCA_001623365.2 | 387,424,359 | 43.61 |
Symbiodinium kawagutii (Dinoflagellate) | GCA_009767595.1 | 935,067,369 | 45.54 |
Homo sapiens (Human) | GCA_000001405.28 | 3,099,706,404 | 41.04 |
Palaemon carinicauda (Crustacean) | GCA_004011675.1 | 6,699,723,695 | 37.37 |
Pinus taeda (Loblolly Pine) | GCA_000404065.3 | 22,103,635,615 | 37.45 |