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Table 3 The protein features by BioProt

From: LPI-deepGBDT: a multiple-layer deep framework based on gradient boosting decision trees for lncRNA–protein interaction identification

Feature group

Features

Number

Amino acid composition

Amino acid composition

20

Dipeptide composition

400

Tripeptide composition

8000

Autocorrelation

Normalized Moreau–Broto

240

autocorrelation

Moran autocorrelation

240

Geary autocorrelation

240

CTD

Composition

21

Transition

21

Distribution

105

Conjoint triad

Conjoint triad features

343

Quasi-sequence order

Sequence order coupling

60

number

Quasi-sequence order

100

descriptors

Pseudo amino acid composition

Pseudo amino acid

50

composition

Amphiphilic pseudo

50

amino acid composition