Deep learning for cancer type classification and driver gene identification

BMC Bioinformatics

Table 3 The confusion matrix for our proposed model

Predicted	Predicted class cancer sequence
Predicted	Germline sequence		Cancer sequence
True	Positive	Negative	Positive	Negative
Breast
Positive	161	31	169	22
Negative	36	608	39	604
Colorectal
Positive	73	11	72	11
Negative	15	737	8	743
Brain
Positive	124	29	100	53
Negative	67	616	53	628
Uterus
Positive	64	42	62	44
Negative	22	708	16	713
Lung
Positive	88	58	94	52
Negative	33	657	60	628
Kidney
Positive	48	19	49	19
Negative	18	751	26	741
Prostate
Positive	57	31	50	38
Negative	30	719	36	710

ISSN: 1471-2105