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Fig. 3 | BMC Bioinformatics

Fig. 3

From: Concatenation of paired-end reads improves taxonomic classification of amplicons for profiling microbial communities

Fig. 3

Reference database performance comparison between Greengenes (GG) and SILVA. A Distribution of the percent of ASVs classified to the genus level across pipelines. B Distribution of F-measure across pipelines. Distributions consider all ten mock communities, with medians shown inside boxplots. SILVA has more ASVs identified to the genus level than GG, including more TPs and fewer FPs, resulting in a higher average F-measure in all pipelines

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BMC Bioinformatics

ISSN: 1471-2105

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