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Fig. 3 | BMC Bioinformatics

Fig. 3

From: Functional glyco-metagenomics elucidates the role of glycan-related genes in environments

Fig. 3

Glycan-related genes identified from environmental metagenome sequences. a Ratio of glycan-related genes in each environment. To calculate the ratio, the number of reads mapped to glycan-related genes was divided by the total number of reads. b Relative abundance of enzyme classes of CAZy in the identified glycan-related genes. GH glycoside hydrolase, GT glycosyltransferase, CE carbohydrate esterase, PL polysaccharide lyase, CBM carbohydrate binding module, AA auxiliary activities. c Ratio of glycan-related genes perfectly matched with the sequence stored in the dbCAN database. The body of box plots in (a) and (c) goes from the first to third quartiles of the distribution and the center line is at the median. The abbreviation of the environmental names are Bio biofilm, dSea deep sea, Gut gut, Hot hot spring, Oil oil contaminated, Oral oral, Rhi rhizosphere, Sea sea, Swg sewage, Skin skin, Soil soil, tGut tumor gut

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