Table 2 LefSe results for the lean/obesity dataset computed for different types of biomarkers. In bold are the highest performing results, and results within a standard deviation, for fraction differentially abundant microbes and median effect size
From: Improved detection of disease-associated gut microbes using 16S sequence-based biomarkers
Differential biomarkers in obesity identified using LefSe | ||
|---|---|---|
Biomarker type | Fraction differentially abundant | Median effect size |
otu95 | 0.292 | 0.008 |
otu97 | 0.275 | 0.011 |
otu99 | 0.239 | 0.012 |
micropheno4 | 0.222 | 0.013 |
micropheno6 | 0.312 | 0.008 |
micropheno8 | 0.331 | 0.008 |
ditaxa | 0.356 | 0.009 |
sbb1 | 0.329 | 0.004 |
sbb2 | 0.323 | 0.013 |
sbb3 | 0.260 | 0.020 |