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Fig. 1 | BMC Bioinformatics

Fig. 1

From: A consensus-based ensemble approach to improve transcriptome assembly

Fig. 1

Numbers of assembled contigs shared between the four de novo assemblers. The numbers of correctly (black) and incorrectly (red) assembled contigs are shown. The three benchmark datasets (No0-NoAlt, Col0-Alt, and Human HG38) were assembled by the four de novo methods. Results based on individual methods using the default settings are shown under "Individual". Results based on comparing the "pooled unique" contig sets assembled using the four methods with multiple kmer lengths are shown under "Pooled". All contigs were compared at the protein level. The outlined region represents where the shared correct and incorrect contigs were counted for the ConSemble3+d assembly (shown as TP and FP in Additional file 2: Table S6)

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