Fig. 4

Numbers of assembled contigs shared between de novo and genome-guided assemblies. The "Merged" assemblies in Additional file 2: Table S5 were used for the de novo assembly datasets. The genome-guided assembly is the union set of the assemblies generated by the four genome-guided methods using the same reference genomes (Additional file 2: Tests 4, 6, and 8 in Table S2). The numbers of correctly (black) and incorrectly (red) assembled contigs are shown. All contigs were compared at the protein level