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Table 1 Minimum test MSE and optimal regularization parameters for RR, LASSO, EN and LAVA evaluated on the simulated QTLMAS data

From: A proximal LAVA method for genome-wide association and prediction of traits with mixed inheritance patterns

Method

minMSE

\(\lambda _1\)

\(\lambda _2\)

Time

RR

83.41

4587.9

 

10.5

LASSO

66.11

294.3

 

121.6

EN

66.11

288.3

0.001

123.2

LAVA

65.89

297.3

211,395.0

201.8

  1. Time in seconds is for the last evaluation with optimized regularization parameters
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BMC Bioinformatics

ISSN: 1471-2105

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