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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Differential expression analysis using a model-based gene clustering algorithm for RNA-seq data

Fig. 2

Effect of the different cluster numbers for MBCdeg (K = 2–4). Boxplots of AUC values (100 trials) for MBCdeg1 (K = 2–4; colored in black) and MBCdeg2 (K = 2–4; colored in red) are shown. The remaining legends are the same as in Fig. 1. The AUC values for MBCdeg with K = 3 were similar to those in Fig. 1 (different trials were used). Note that two trials result in AUC < 0.4 (not shown): MBCdeg1 with K = 2 with PDEG = 0.05 and P1 = 0.9 (AUC = 0.3498), and MBCdeg1 with K = 4 with PDEG = 0.25 and P1 = 1.0 (AUC = 0.3893)

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