Fig. 3From: Improved supervised prediction of aging-related genes via weighted dynamic network analysisOverlaps (expressed as Jaccard indices) between true positive predictions of the eight considered (sub)networks, each under its best predictive model, when using the primary GenAge-based definition of aging- and non-aging-related gene labels, and when using HPRD. On the x- and y-axes, the numbers in the parentheses after the name of each subnetwork are the number of true positive predictions (i.e., known aging-related genes) and the number of total predictions. Within each table/matrix cell, the number on the first line is the Jaccard index of the overlap between the corresponding pair of subnetworks; the number on the second line is the raw overlap size, i.e., the actual count of true positives that are in the overlap between the two subnetworks; the number on the third line is the adjusted p-value of the overlap with respect to the hypergeometric test. The darker the color of a given cell, the larger the Jaccard index value, i.e., the higher the overlap. Note that we have two groups of results for wNetWalk-Dynamic, i.e., wNetWalk-Dynamic Existing and wNetWalk-Dynamic Proposed, which we already explained in the caption of Fig. 2. For results when using BioGRID instead of HPRD, see Additional file 1: Fig. S5Back to article page