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Table 2 Properties of individual networks and the composite PangenomeNet

From: PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

No. nodes

Nodesa

Components

Core

Accessory

Hypothetical

Totalb

3053

–

1001

2052

1122

RefseqNet

1834

5

1001

833

225

EskapeNet

1960

9

997

963

321

StringNet

1118

1

982

136

105

DomainNet

2131

35

994

1137

319

PangenomeNet

2284

12

1001

1283

424

EcoliNet

1095

5

964

131

0

Mentha

782

64

683

99

0

  1. Bold indicates the properties of PangenomeNet built by this work
  2. aIndicates gene clusters constructed from the pan-genome
  3. bIndicates the 1001 core genes along with the 2052 accessory genes associated with at least one drug (selected by Scoary)
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BMC Bioinformatics

ISSN: 1471-2105

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