Skip to main content

Table 2 Comparison results using the CASF benchmark datasets

From: Binding affinity prediction for protein–ligand complex using deep attention mechanism based on intermolecular interactions

Datasets

Methods

MAE

RMSE

PCC

SCC

SD

CASF-2016

BAPA

1.021

1.308

0.819

0.819

1.247

OnionNet

1.137

1.542

0.707

0.715

1.539

Pafnucy

1.327

1.647

0.685

0.681

1.584

PLEC

1.138

1.454

0.760

0.753

1.412

RF-score

1.121

1.395

0.812

0.805

1.269

CASF-2013

BAPA

1.170

1.457

0.771

0.774

1.433

OnionNet

1.423

1.890

0.555

0.605

1.872

Pafnucy

1.503

1.862

0.592

0.592

1.815

PLEC

1.246

1.615

0.716

0.724

1.571

RF-score

1.293

1.572

0.751

0.757

1.487

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us