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Fig. 6 | BMC Bioinformatics

Fig. 6

From: Automated annotation of rare-cell types from single-cell RNA-sequencing data through synthetic oversampling

Fig. 6

Validation of the sc-SynO model for the first use case of cardiac glial cell annotation. a UMAP representation of the manually clustered Bl6 dataset of Wolfien et al. [15]. Predicted cells of sc-SynO are highlighted in blue, cells not chosen are grey. b UMAP representation of the manually clustered dataset of Vidal et al. [16]. Precicted cells of sc-SynO are highlighted in blue, cells not chosen are grey. c Average expression of the respective top five cardiac glial cell marker genes for both validation sets, including the predicted clusters and those in proximity

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BMC Bioinformatics

ISSN: 1471-2105

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