Table 3 Table showing F1-Scores/Precision/Recall for sc-SynO against baseline classification for our two ML classifiers (lr and knn) and for several numbers of pre-selected features (Marker genes). 119_Pvalb represents a small subpopulation of the Allen Brain atlas
Dataset | ML | Features | Baseline | sc-SynO |
|---|---|---|---|---|
Glial cells | lr | 20 | .96/.94/1 | .96/.94/1 |
Glial cells | knn | 20 | .97/1/.95 | .94/.90/1 |
Glial cells | lr | 50 | .90/.94/.88 | .94/.94/.95 |
Glial cells | knn | 50 | .89/1/.81 | .94/.90/1 |
Prl cardio | lr | 20 | .80/.87/.74 | .72/.62/.86 |
Prl cardio | knn | 20 | .86/.91/.81 | .85/.79/.92 |
Prl cardio | lr | 100 | .86/.88/.84 | .84/.81/.87 |
Prl cardio | knn | 100 | .86/.95/.79 | .79/.68/.95 |
119_Pvalb | lr | 50 | .43/.45/.41 | .65/.49/.99 |
119_Pvalb | lr | 100 | .45/.48/.42 | .65/.49/.99 |