Table 4 The cytogenetic bands across the whole genome identified as significantly associated with the RMS subtype by MCKAT
From: MCKAT: a multi-dimensional copy number variant kernel association test
Chr. | Arm | Band | Start | Stop | #CNVs | P-value |
|---|---|---|---|---|---|---|
2 | p | 25.3 | 1 | 4,400,000 | 111 | \(1.0\times 10^{-4}\) |
2 | p | 22.3 | 31,800,000 | 36,300,000 | 117 | \(1.0\times 10^{-4}\) |
2 | p | 11.2 | 83,100,001 | 91,800,000 | 314 | \(2.0\times 10^{-4}\) |
11 | p | 15.5 | 1 | 2,800,000 | 304 | \(4.7\times 10^{-8}\) |
11 | p | 15.4 | 2,800,001 | 11,700,000 | 269 | \(3.0\times 10^{-4}\) |
11 | q | 14.1 | 27,200,001 | 31,000,000 | 100 | \(2.0\times 10^{-4}\) |
11 | q | 13.3 | 68,700,001 | 70,500,000 | 46 | \(1.0\times 10^{-4}\) |
11 | q | 22.3 | 103,000,001 | 110,600,000 | 145 | \(1.9\times 10^{-3}\) |
13 | q | 34.0 | 109,600,001 | 114,364,328 | 115 | \(4.0\times 10^{-4}\) |