Table 6 Result of random access decompression speed
From: FCLQC: fast and concurrent lossless quality scores compressor
Filename | Comparison of random access decompression speed (s) | |||||
|---|---|---|---|---|---|---|
FCLQC | LCQS | |||||
Low | Mid | High | Low | Mid | High | |
SRR554369_1 | \(\mathbf{0.148 }\pm \mathbf{0.063 }\) | \(\mathbf{0.383 }\pm \mathbf{0.075 }\) | \(\mathbf{0.572 }\pm \mathbf{0.055 }\) | 50.027 | 50.082 | 50.213 |
SRR554369_2 | \(\mathbf{0.133 }\pm \mathbf{0.052 }\) | \(\mathbf{0.379 }\pm \mathbf{0.078 }\) | \(\mathbf{0.567 }\pm \mathbf{0.054 }\) | 52.310 | 52.507 | 52.627 |
SRR327342_1 | \(\mathbf{0.834 }\pm \mathbf{0.399 }\) | \(\mathbf{2.194 }\pm \mathbf{0.361 }\) | \(\mathbf{3.579 }\pm \mathbf{0.371 }\) | 52.855 | 55.487 | 56.429 |
SRR327342_2 | \(\mathbf{1.073 }\pm \mathbf{0.417 }\) | \(\mathbf{2.787 }\pm \mathbf{0.440 }\) | \(\mathbf{4.554 }\pm \mathbf{0.497 }\) | 54.961 | 57.307 | 58.232 |
SRR870667_1 | \(\mathbf{6.335 }\pm \mathbf{1.534 }\) | \(\mathbf{14.695 }\pm \mathbf{2.389 }\) | \(\mathbf{24.424 }\pm \mathbf{2.323 }\) | 53.417 | 54.124 | 52.771 |
SRR870667_2 | \(\mathbf{6.048 }\pm \mathbf{1.421 }\) | \(\mathbf{14.175 }\pm \mathbf{2.118 }\) | \(\mathbf{21.984 }\pm \mathbf{2.465 }\) | 58.847 | 58.174 | 57.997 |
syn_read1 | \(\mathbf{32.432 }\pm \mathbf{4.864 }\) | \(73.781 \pm 10.756\) | \(97.296 \pm 15.459\) | 60.651 | 62.135 | 63.547 |
syn_read2 | \(\mathbf{31.541 }\pm \mathbf{4.498 }\) | \(70.991 \pm 9.648\) | \(94.623 \pm 13.132\) | 61.965 | 62.456 | 63.165 |