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Table 1 Dataset abbreviations for cancer datasets used in DEGnext

From: DEGnext: classification of differentially expressed genes from RNA-seq data using a convolutional neural network with transfer learning

Dataset abbreviation

Cancer type

Dataset abbreviation

Cancer type

BLCA

Bladder urothelial carcinoma

LIHC

Liver hepatocellular carcinoma

BRCA

Breast invasive carcinoma

LUAD

Lung adenocarcinoma

CHOL

Cholangiocarcinoma

LUSC

Lung squamous cell carcinoma

COAD

Colon adenocarcinoma

PRAD

Prostate adenocarcinoma

ESCA

Esophageal carcinoma

READ

Rectum adenocarcinoma

HNSC

Head and neck squamous cell carcinoma

STAD

Stomach adenocarcinoma

KICH

Kidney Chromophobe

THCA

Thyroid carcinoma

KIRC

Kidney renal clear cell carcinoma

UCEC

Uterine Corpus endometrial carcinoma

KIRP

Kidney renal papillary cell carcinoma

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