Fig. 7
From: LaRA 2: parallel and vectorized program for sequence–structure alignment of RNA sequences
Run time of LaRA 2 for computing the base pair probabilities of 838 sequences of the Plastids data set and pairwise alignment of the 350703 combinations. Multiple alignment is not considered here. The matrix shows the run time for 1, 4, 8 and 16 threads with different SIMD instruction sets, which compute 1, 4 or 8 alignments per thread. In the bar-graph, we reported the time with minute:second [m:s] notation