From: SweepCluster: A SNP clustering tool for detecting gene-specific sweeps in prokaryotes
Chr | ClusterID in Ref | First SNP | Last SNP | Cluster size | Cluster length | p value | Gene loci range |
---|---|---|---|---|---|---|---|
chr1 | 1 | 2,999,463 | 3,017,933 | 50 | 18,471 |  < 10–8 | FAZ90_RS13520-FAZ90_RS13590 |
chr1 | 3 | 3,022,425 | 3,038,568 | 53 | 16,144 |  < 10–8 | FAZ90_RS13690-FAZ90_RS13840 |
chr1 | 3 | 3,044,230 | 3,045,684 | 63 | 1455 |  < 10–8 | |
chr1 | 3 | 3,052,101 | 3,059,345 | 158 | 7245 |  < 10–8 | |
chr2 | 12 | 307,956 | 307,979 | 6 | 24 |  < 10–8 | FAZ90_RS16555 |
chr2 | 11 | 353,294 | 354,071 | 27 | 778 |  < 10–8 | FAZ90_RS16800 |
chr2 | 10 | 533,257 | 533,284 | 6 | 28 |  < 10–8 | FAZ90_RS17530 |
chr2 | 8 | 744,397 | 745,417 | 35 | 1021 |  < 10–8 | FAZ90_RS18465-FAZ90_RS18470 |
chr2 | 13 | 1,514,577 | 1,525,409 | 36 | 10,833 |  < 10–8 | FAZ90_RS21880-FAZ90_RS21930 |
chr2 | 7 | 1,642,124 | 1,642,167 | 2 | 44 | 1.2 × 10–5 | FAZ90_RS22415 |
chr2 | 6 | 1,685,459 | 1,686,320 | 103 | 862 |  < 10–8 | FAZ90_RS22615 |