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Fig. 3 | BMC Bioinformatics

Fig. 3

From: ImmunoDataAnalyzer: a bioinformatics pipeline for processing barcoded and UMI tagged immunological NGS data

Fig. 3

Read assignment visualization of the number of assigned reads after executing MIGEC commands in MIGEC sub-process. The left column shows the raw data read counts for each available input file in FASTQ file format. The central column shows the number of reads after de-multiplexing and the right column shows the number of reads after UMI assembling and consensus sequence building. For all files, reads that could not be assigned to a specific sample, due to barcode or primer errors, are assigned to undef-m (=undetermined reads)

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