Table 6 Average speed in CUI concept pairs per second (pairs/s) for the evaluation of random CUI pairs with three representative ontology-based similarity measures based on the SNOMED-CT US 2019AB ontology (357,406 nodes) implemented by the three UMLS-based semantic measures libraries reported in the literature
From: HESML: a real-time semantic measures library for the biomedical domain with a reproducible survey
| Similarity measure | UMLS::Similarity | SML | HESML |
|---|---|---|---|
| Avg. speed (pairs/s) | Avg. speed (pairs/s) | Avg. speed (pairs/s) | |
| Rada [71] | 0.122 (15) | xxx | 0.041 (15) |
|
AncSPL-Rada (this work) | – | – | 30110 \((10^7)\) |
| Lin-Seco [87, 110] | 0.744 (500) | 202160 \((10^7)\) | 491942 \((10^7)\) |
| Wu-Palmer\(_{fast}\) [72] | 0.035 (15) | – | 435252 \((10^7)\) |