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Table 5 Top 15 predicted lncRNAs associated with breast cancer

From: gGATLDA: lncRNA-disease association prediction based on graph-level graph attention network

Disease similarity based on gene–gene interaction network Disease similarity based on disease semantic
Rank lncRNA Evidence Rank lncRNA Evidence
1 KCNQ1OT1 Lnc2Cancer 3.0 1 TRAF3IP2-AS1 PMID: 30157476
2 UCA1 Lnc2Cancer 3.0 2 DLX6-AS1 Lnc2Cancer 3.0
3 MIAT Lnc2Cancer 3.0 3 MINA PMID: 30254753
4 MINA PMID: 30254753 4 KCNQ1OT1 Lnc2Cancer 3.0
5 NPTN-IT1 Lnc2Cancer 3.0 5 NEAT1 Lnc2Cancer 3.0
6 LincRNA-p21 Lnc2Cancer 3.0 6 LincRNA-p21 Lnc2Cancer 3.0
7 IGF2-AS PMID: 33175607 7 UCA1 Lnc2Cancer 3.0
8 DRAIC LncRNADisease v2.0 8 SOX2-OT Lnc2Cancer 3.0
9 NEAT1 Lnc2Cancer 3.0 9 NPTN-IT1 Lnc2Cancer 3.0
10 PCAT29 PMID: 32521844 10 HULC Lnc2Cancer 3.0
11 HULC Lnc2Cancer 3.0 11 CRNDE LncRNADisease v2.0
12 CCND1 LncRNADisease v2.0 12 TUSC7 Lnc2Cancer 3.0
13 SPRY4-IT1 Lnc2Cancer 3.0 13 7SK unconfirmed
14 SOX2-OT Lnc2Cancer 3.0 14 WT1-AS LncRNADisease v2.0
15 TUSC7 Lnc2Cancer 3.0 15 ESCCAL-1 unconfirmed