Table 7 Top 15 predicted lncRNAs associated with prostate cancer
From: gGATLDA: lncRNA-disease association prediction based on graph-level graph attention network
Disease similarity based on gene–gene interaction network | Disease similarity based on disease semantic | ||||
|---|---|---|---|---|---|
Rank | lncRNA | Evidence | Rank | lncRNA | Evidence |
1 | H19 | LncRNADisease v2.0 | 1 | TRAF3IP2-AS1 | unconfirmed |
2 | MALAT1 | Lnc2Cancer 3.0 | 2 | DLX6-AS1 | PMID: 33035382 |
3 | TRAF3IP2-AS1 | unconfirmed | 3 | SNHG11 | Lnc2Cancer 3.0 |
4 | PVT1 | Lnc2Cancer 3.0 | 4 | H19 | LncRNADisease v2.0 |
5 | MEG3 | Lnc2Cancer 3.0 | 5 | IGF2-AS | Lnc2Cancer 3.0 |
6 | XIST | Lnc2Cancer 3.0 | 6 | TERC | LncRNADisease v2.0 |
7 | CDKN2B-AS1 | LncRNADisease v2.0 | 7 | GAS5 | Lnc2Cancer 3.0 |
8 | UCA1 | Lnc2Cancer 3.0 | 8 | MALAT1 | Lnc2Cancer 3.0 |
9 | KCNQ1OT1 | Lnc2Cancer 3.0 | 9 | C1QTNF9B-AS1 | Lnc2Cancer 3.0 |
10 | GAS5 | Lnc2Cancer 3.0 | 10 | MEG3 | Lnc2Cancer 3.0 |
11 | IGF2-AS | Lnc2Cancer 3.0 | 11 | XIST | Lnc2Cancer 3.0 |
12 | HOTAIR | Lnc2Cancer 3.0 | 12 | PVT1 | Lnc2Cancer 3.0 |
13 | TUG1 | Lnc2Cancer 3.0 | 13 | HOTAIR | Lnc2Cancer 3.0 |
14 | TERC | LncRNADisease v2.0 | 14 | KCNQ1OT1 | Lnc2Cancer 3.0 |
15 | CTBP1-AS | Lnc2Cancer 3.0 | 15 | CDKN2B-AS1 | LncRNADisease v2.0 |