Skip to main content
Fig. 4 | BMC Bioinformatics

Fig. 4

From: RNA-combine: a toolkit for comprehensive analyses on transcriptome data from different sequencing platforms

Fig. 4

Application of scRNA-seq data analysis workflow to 3k PBMC scRNA dataset. a UMAP (Uniform Manifold Approximation and Projection) plot of predicted single cells (grey) and doublets (black). b UMAP plot of 9 cell clusters. c Examples of expression of classical cell markers, FCGR3A is a marker for FCGR3A+ monocytes, IL7R for T cells, PPBP for megakaryocytes, NKG7 for natural killer cells, CD79A for B cells, and CST3 for monocytes and monocyte derived dendritic cells. d Cell connectivity of cell clusters

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us