Table 3 Model performance comparison to other studies
From: Hierarchical shared transfer learning for biomedical named entity recognition
BC5CDR | BC2GM | BC4CHEMD | NCBI-disease | LINNAEUS | ||
|---|---|---|---|---|---|---|
Chemical | Disease | |||||
Crichton et al. [18] | 89.22 | 80.46 | 73.04 | 82.95 | 80.46 | 83.98 |
Yoon et al. [37] | 93.31 | 84.08 | 79.73 | 88.85 | 86.36 | – |
Lee et al. [26] | 93.44 | 86.56 | 84.40 | 91.41 | 89.36 | 89.81 |
BERT [26] | 91.16 | 82.41 | 81.79 | 90.04 | 85.63 | 87.60 |
PubWebBERT [27] | 93.33 | 85.62 | 84.52 | – | 87.82 | – |
HunFlair [38] | – | – | – | – | 88.65 | – |
STL | 93.36 | 86.44 | 82.52 | 91.70 | 88.26 | 88.56 |
Proposed | 93.83 | 87.28 | 82.92 | 92.42 | 89.25 | 86.37 |