Skip to main content

Table 1 List of all the epitopes used in the construction of the recombinant multi-epitope vaccine

From: In silico design of recombinant multi-epitope vaccine against influenza A virus

PROTEIN

CTL epitope

HTL epitope

B-CELL epitope

Hemagglutinin

KSYINNRGK

KPEIGARPKVNGQSG

TELLEDTHNGKLCDLKGVAPLDLG

 

SSNYQQKFK

LIWLLKKNDNAAYPK

 
 

NIHPITIGK

SSLPFQNIHPITIGK

KGAINSSLPFQNIHP

 

CPRAGSKSF

ANNSTTTVDTLTEKN

 
 

LPFQNIHPI

EQGSGYAADLKSTQK

LKLATGLRNV

 

AVILAGLSF

LIEKMNTQFEAIDKE

 
  

NSTTTVDTLTEKNVE

 

Neuraminidase

ITTVTLHFK

MGRTISEKSRSGYEM

TTLNNKHSNGTIHDRSP

  

NQEIVNITNTIIEKE

GSASGQADTK

 

ITGFAPFSK

NSKFQINRQDIVDID

YGTGSWPDGADINF

  

NQEIVNITNTIIEKE

VRCVCRDNWKGSNRPWVDIN

Matrix

RMGTVNTEV

TNPLIRHENRMVLAS

PSGPTRNEWECRCS

  

NPLIRHENRMVLAST

YGLKRVALSYST

 

AVKLYRRFK

VLGFVFTLTVPSERG

RMGTVNTEVA

 

GLKRVALSY

TEQQSAVDVDDGHFV

VQAMRTIGTEQQSAVDVDDG

  

GTEQQSAVDVDDGHF

ELEQKRMGLQM

   

GVLGFVFTLTVPSERGLQRR

  1. Predicted linear B-cell epitopes and T-cell epitopes were selected from HA, NA, M2 proteins to design of the recombinant multi-epitope peptide