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Fig. 5 | BMC Bioinformatics

Fig. 5

From: A data management infrastructure for the integration of imaging and omics data in life sciences

Fig. 5

Data availability for the HCC clinical study use case. A Schematics of the datasets collected for the clinical trial. Radiological imaging data (CT-perfusion (CT), CT-guided biopsy (CTP), MRI-PET (MP) with FDG and Choline tracers) and multi-omics data (metabolomics, genomics and transcriptomics) are integrated into the openBIS metadata model. All data is available to the project partners through our portal. The graph representation allows a quick visualization of the experimental design [22, 23]. B The image viewer portlet offers an overview of the available imaging data for the project, and provides access to selected metadata. The user is also provided with a link to a full image viewer for the reconstructed tomograms. C Sample images of MRI (left) and CT (right) of the abdomen for one of the patients. If tumor annotations by the radiologists are available, they can be displayed as an extra channel (here in red). D Summary of the tumor genomics findings for all patients with available genomics data (N = 16), selected mutated genes are displayed

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