Table 3 Feature performance
From: Primary case inference in viral outbreaks through analysis of intra-host variant population
K-mer entroppy | 9/11 |
Average nucleotide entropy | 9/11 |
Mean hamming distance | 9/11 |
Max hamming distance | 9/11 |
Nucleotide diversity | 8/11 |
Haplotype entropy | 8/11 |
Mutation frequency | 8/11 |
1-step component entropy | 8/11 |
Epistasis coefficient | 6/11 |
Frequency entropy | 3/11 |
Hill numbers | 3/11 |
Mean consensus | 2/11 |
Simpson index | 2/11 |