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Fig. 4 | BMC Bioinformatics

Fig. 4

From: D3PM: a comprehensive database for protein motions ranging from residue to domain

Fig. 4

A Frequencies of 20 amino acid residues in overall protein structure (blue) or binding sites around ligand by 3.0 Å (orange) and 5.0 Å (green). The residues are grouped in yellow, gray and cyan blocks, according to the largest frequency belongs to pocket-3.0 Å, pocket-5.0 Å and overall structure, respectively. (*) the difference between the overall structure and binding site around ligand by 3.0 or 5.0 Å is statistically significant at the 5% level (p < 0.05). (**) the difference between the overall structure and binding site around ligand by 3.0 or 5.0 Å is statistically very significant at the 1% level (p < 0.01). Frequencies of 20 amino acid residues easy to move within binding pocket defined with the cutoff of 3.0 (B) or 5.0 Å (C)

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