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Table 2 The prediction results of single-type DDIs

From: Predict multi-type drug–drug interactions in cold start scenario

Methods Single-type DDIs
S1 S2
AUC AUPR F1 AUC AUPR F1
CSMDDI-SVD 0.8137 0.6121 0.3735 0.7266 0.4783 0.3698
CSMDDI-GAE 0.7223 0.4435 0.3735 0.6387 0.3390 0.3726
CSMDDI-RESCAL 0.8861 0.7270 0.4065 0.7709 0.5270 0.3751
TransE + RandomForest 0.6451 0.4371 0.3730 0.4391 0.1116 0.3679
DeepDDI(S) 0.7267 0.5087 0.3725 0.7254 0.4804 0.3745
DDIMDL(SP) 0.7556 0.5592 0.3732 0.7215 0.4729 0.3718
  1. (S) denotes that the inputs of the prediction method are chemical substructures
  2. (P) denotes that the inputs of the prediction method are drug-associated proteins