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Table 3 The prediction result of multi-type DDIs

From: Predict multi-type drug–drug interactions in cold start scenario

Method

Multi-type

\(S1\)

\(S2\)

AUC

AUPR

F1-micro

AUC

AUPR

F1-micro

TransE + RandomForest

0.8163

0.2853

0.5163

0.3843

0.0926

0.4040

DeepDDI(S)

0.8864

0.4638

0.6042

0.4500

0.1720

0.4825

DDIMDL(SP)

0.8832

0.4597

0.6292

0.4337

0.2062

0.5173

CSMDDI-RESCAL

0.8658

0.5865

0.7168

0.4313

0.2003

0.5103

  1. (S) denotes that the inputs of the prediction method are chemical substructures
  2. (P) denotes that the inputs of the prediction method are drug-associated proteins
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BMC Bioinformatics

ISSN: 1471-2105

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