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Table 2 Number of complexes and in each class of the Dataset

From: Hierarchical representation for PPI sites prediction

Class

Data partition

Complex

Positive

Negative

b (%)

u (%)

b (%)

u (%)

\(A_r\)

Train

8

8

9

92

91

Validation

3

9

10

91

90

Test

7

8

10

92

90

\(A_l\)

Train

9

14

16

86

84

Validation

3

14

15

86

85

Test

8

14

15

86

85

\(AB_r\)

Train

4

9

11

91

89

Validation

3

8

9

92

91

Test

5

8

9

92

91

\(AB_l\)

Train

4

13

13

87

87

Validation

3

14

13

86

87

Test

4

16

16

84

84

\(EI_r\)

Train

18

15

15

85

85

Validation

12

15

16

85

84

Test

14

15

16

85

84

\(EI_l\)

Train

16

29

33

71

67

Validation

12

32

34

68

66

Test

16

30

32

70

68

\(ER_r\)

Train

14

13

13

87

87

Validation

3

12

12

88

88

Test

9

11

11

89

89

\(ER_l\)

Train

10

20

21

80

79

Validation

5

26

22

74

78

Test

11

25

22

75

78

\(ES_r\)

Train

7

9

12

91

88

Validation

3

10

12

90

88

Test

7

11

12

89

88

\(ES_l\)

Train

7

25

21

75

79

Validation

3

25

23

75

77

Test

6

22

21

78

79

\(OG_r\)

Train

8

9

9

91

91

Validation

3

10

9

90

91

Test

8

12

12

88

88

\(OG_l\)

Train

9

24

24

76

76

Validation

2

22

21

78

79

Test

7

19

20

81

80

\(OR_r\)

Train

10

14

13

86

87

Validation

4

12

11

88

89

Test

9

13

14

87

86

\(OR_l\)

Train

9

23

23

77

77

Validation

5

21

21

79

79

Test

10

23

24

77

76

\(OX_r\)

Train

17

16

15

84

85

Validation

11

15

15

85

85

Test

19

14

13

86

87

\(OX_l\)

Train

16

18

18

82

82

Validation

14

19

20

81

80

Test

20

20

21

80

81

  1. Positive examples are residue pairs that participate in the interface, negative examples are pairs that do not