Organism | S. cerevisiae | M. musculus (liver) | A. thaliana (whole leaf) | |||
---|---|---|---|---|---|---|
Synch. in | Cell cycle | Cell cycle | Circadian | Circadian | Diurnal | Circadian |
Technology | RNASeq | Microarray | Microarray | RNASeq | Microarray | Microarray |
Period | 75Â min* | 94Â min* | 24Â h | 24Â h | 24Â h | 24Â h |
Duration | 245Â min | 254Â min | 48 | 42 | 48 | 48 |
Frequency | 5Â min | 16Â min | 2Â h | 6Â h | 4Â h | 4Â h |
Timepoints/cycle | 15 | 5.875 | 12 | 4 | 6 | 6 |
Reference | [53] | [6] | [29] | [29] | [26] (LL_LDHC) | [26] (LDHC) |
No. of genes\(^{\dagger }\) | 5910 | 5718 | 19,750 | 18,388 | 22,484 | 22,484 |
No. of TFs\(^{\dagger }\) | 304 | 307 | 1373 | 1118 | 1415 | 1415 |
No. of core | 17 | 17 | 15 | 14 | 11 | 11 |