Table 3 Performance of A-Prot and trRosetta using same MSA of ours on 25 CASP14 FM, FM/TBM, TBM-Hard domains. (Inter-residue distance and angles are measured using Pearson correlation between predicted bin indexes of max probability and ground truth, Top L for long range contact precision)
From: A-Prot: protein structure modeling using MSA transformer
Method | \(\theta\) | \(\varphi\) | \(\omega\) | \({\text{d}}\) | Top L | TMS | lDDT |
|---|---|---|---|---|---|---|---|
trRosetta | 0.539 | 0.498 | 0.459 | 0.362 | 0.363 | 0.524 | 0.457 |
A-Prot | 0.604 | 0.578 | 0.528 | 0.464 | 0.424 | 0.576 | 0.499 |