Skip to main content
Fig. 1 | BMC Bioinformatics

Fig. 1

From: 3GOLD: optimized Levenshtein distance for clustering third-generation sequencing data

Fig. 1

3GOLD accommodates upstream and downstream frameshift. A SLD is lower than LD when computing a single deletion-induced downstream frameshift. If an upstream frameshift occurs due to the single base deletion, there is no benefit to using SLD over LD. B The benefit of SLD accommodating frameshift can be rescued in the case of an upstream frameshift by calculating the SLD of mirrored sequences, effectively converting upstream frameshift to downstream frameshift

Back to article page