Table 1 Sensitivity and specificity of clustering tools on ONT MinION R9.4.1 biological data
From: 3GOLD: optimized Levenshtein distance for clustering third-generation sequencing data
Clustering tool | Specificity | Sensitivity range | Sensitivity average | Sensitivity insignificant P-values |
|---|---|---|---|---|
3GOLD | 100% (0.00) | 100–67% | 98.83% (5.74) |  |
SLD | 100% (0.00) | 92–22% | 70.84% (13.04) |  |
LD | 100% (0.00) | 70–25% | 46.07% (10.45) | LD vs. CD-HIT-EST [0.0733] |
Starcode | 100% (0.00) | 70–21% | 42.44% (10.78) | Starcode vs. LD [0.3244] |
CD-HIT-EST | 100% (0.00) | 85–24% | 50.83% (17.50) |  |
DNACLUST | 100% (0.00) | 49–20% | 28.43% (8.59) |  |