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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Clustering biological sequences with dynamic sequence similarity threshold

Fig. 2

Number of sequence clusters derived by the clustering tools. γlow for ALFATClust varies from 0.8 down to 0.7 and T for others varies from 0.9 down to 0.7, both with a step size of 0.05. The values of γlow or T are distinguished by different colours. Only ALFATClust, CD-HIT, UCLUST, and MMseqs2 can cluster protein sequences. The lowest value of T allowed for nucleotide sequences by CD-HIT is 0.8. DNACLUST cannot cluster some plasmid nucleotide sequences that are too short

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