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Table 3 Input parameters of PyToxo

From: PyToxo: a Python tool for calculating penetrance tables of high-order epistasis models

Parameter

Description

Compulsory

Default value

P(D) (or \(h^2\))

Established prevalence (or heritability)

Yes

MAFs

Minor allele frequencies of each locus

Yes

\(f_i(x,y)\)

Function of two variables that defines the epistasis model

Yes

check

Boolean variable that enables checking the correctness of the solution

No

True

Timeout

Maximum time to achieve a solution

No

True*

  1. *Time is computed based on the order of the model