Table1 Consequence types of mutations in the CRC subtypes

3_prime_UTR_variant

3.08

3.21

2.5

2.94

2.94

2.28

0.38

5_prime_UTR_premature_start_codon_gain_variant

0.19

0.16

0.18

0.23

0.16

0.14

0.02

5_prime_UTR_variant

0.66

0.7

0.82

0.69

0.77

0.64

0.11

downstream_gene_variant

19.94

17.54

18.68

17.79

15.17

17.22

9.26

exon_variant

10.81

10.69

9.68

10.82

8.66

8.03

0.91

initiator_codon_variant

0

0.01

0

0

0

0

0

intergenic_region

0.18

0.06

1.45

0.15

2.67

5.56

21.58

intragenic_variant

0

0

0

0

0

0

0

intron_variant

14.65

15.46

24.61

12.63

27.78

31.56

57.41

missense_variant

23.4

25.98

16.5

25.95

20.87

11.97

0.38

splice_acceptor_variant

0.32

0.23

0.26

0.31

0.2

0.15

0

splice_donor_variant

0.33

0.36

0.27

0.43

0.11

0.14

0.01

splice_region_variant

1.18

1.22

1.04

0.94

1.16

1

0.06

start_lost

0.03

0.03

0.02

0.03

0.01

0.02

0

stop_gained

1.21

1.96

0.88

2.03

2.71

0.79

0.02

stop_lost

0.02

0.01

0.01

0.01

0.03

0.01

0

stop_retained_variant

0.01

0.02

0.01

0.01

0.01

0.01

0

synonymous_variant

10.74

10.56

8.96

11.9

5.92

7.02

0.22

upstream_gene_variant

13.26

11.8

14.14

13.13

10.83

13.47

9.64