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Table 7 Comparison of KnotAli to Cacofold using a spurious alignment

From: KnotAli: informed energy minimization through the use of evolutionary information

Family

KnotAli

Cacofold

Sen

ppv

F

Sen

ppv

F

16s

.548

.495

.519

.198

.467

.277

RF00177

.507

.481

.486

.067

.154

.093

  1. Alignment was chosen based on the results of RNAconTest [60]. As control the results are compared to 16s family from our dataset, with similar number of sequences and length range but medium sequence conservation
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BMC Bioinformatics

ISSN: 1471-2105

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