Fig. 1
From: Accurate and highly interpretable prediction of gene expression from histone modifications
Feature extraction stages for histone mark h over gene g: ChIP-seq raw and processed signals for h are in blue, while the input-field for g is depicted in solid, thick grey. (1) Peak calling: ChIP-seq raw reads are fed as inputs to a peak calling algorithm to reliably extract read-enriched genomic regions. (2) Localisation: Genome-wide peak signals are localised within the defined genes’ input fields. (3) Extraction: The max peak enrichment value is extracted as h’s value into g’s feature vector