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Table 3 The AUC scores for compared methods on real Escherichia coli network

From: RSNET: inferring gene regulatory networks by a redundancy silencing and network enhancement technique

Approach

LASSO

LP

RO

GENIE3

ARACNE

NARROMI

RSNET

AveAUC (TG)

0.7070

0.7039

0.7299

0.6836

0.7330

0.7347

0.7377

AUC > 0.8 (TG)

384 (30.52)

367 (29.17)

439 (34.89)

428 (34.02)

484 (38.47)

485 (38.55)

490 (38.95)

AveAUC (TF)

0.7132

0.7335

0.7439

0.7229

0.7499

0.7537

0.7560

AUC > 0.8 (TF)

57 (36.77)

58 (37.41)

71 (45.80)

60 (38.70)

68 (43.87)

71 (45.80)

72 (46.45)

  1. AveAUC, Average of AUCs for TG/TF; AUV > 0.8, the number of TGs/TFs; '()', the numbers in brackets are percentages
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BMC Bioinformatics

ISSN: 1471-2105

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