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Table 1 Mutations in Alpha (B.1.1.7) clusters

From: ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies

Cluster

S

L18F

T19I

D80A

D215G

241_243del

K417N

E484K

N501Y

D614G

A701V

I896L

*GISAID B.1.351

0

0

1

1

1

1

1

1

1

1

0

Clust 10

0

1

1

1

1

0

1

1

1

1

0

Clust 17

0

1

1

1

1

0

1

1

1

1

0

Clust 19

0

1

1

0

0

0

1

1

1

1

0

Clust 9

0

1

1

1

1

0

1

1

1

1

1

Clust 4

0

0

1

1

1

0

1

1

1

1

0

Clust 1

1

0

1

1

1

0

1

1

1

1

0

Clust 8

0

1

1

1

1

0

1

1

1

1

0

Clust 18

0

1

1

1

1

0

0

0

1

1

0

Clust 3

0

0

1

1

1

0

1

1

1

1

0

Clust 7

0

0

1

1

1

0

1

1

1

1

0

Cluster

S

L18F

T19I

D80A

D215G

241_243del

K417N

E484K

N501Y

D614G

A701V

I896L

*GISAID B.1.351

0

0

1

1

1

1

1

1

1

1

0

Clust 10

0

1

1

1

1

0

1

1

1

1

0

Clust 17

0

1

1

1

1

0

1

1

1

1

0

Clust 19

0

1

1

0

0

0

1

1

1

1

0

Clust 9

0

1

1

1

1

0

1

1

1

1

1

Clust 4

0

0

1

1

1

0

1

1

1

1

0

Clust 1

1

0

1

1

1

0

1

1

1

1

0

Clust 8

0

1

1

1

1

0

1

1

1

1

0

Clust 18

0

1

1

1

1

0

0

0

1

1

0

Clust 3

0

0

1

1

1

0

1

1

1

1

0

Clust 7

0

0

1

1

1

0

1

1

1

1

0

Cluster

ORF3a

E

ORF7b

ORF8

N

L52F

Q57H

W131L

S171L

G254*

P71L

M24V

I26V

I27V

P38S

K44R

I121L

A12T

T205I

*GISAID B.1.351

0

1

0

1

0

1

0

0

0

0

0

0

0

1

Clust 10

0

1

0

0

0

1

1

1

1

0

1

1

0

1

Clust 17

0

1

0

0

0

1

1

0

0

0

1

1

0

1

Clust 19

0

1

0

0

0

1

1

0

0

0

1

1

1

1

Clust 9

0

1

0

0

0

1

1

0

0

0

1

1

0

1

Clust 4

0

1

0

0

0

1

0

0

0

0

0

1

0

1

Clust 1

0

1

1

0

1

1

0

0

0

0

0

0

0

1

Clust 8

0

1

0

0

0

1

1

0

0

0

1

1

0

1

Clust 18

0

1

0

0

0

1

1

1

1

0

1

1

0

1

Clust 3

1

1

0

0

0

1

0

0

0

1

0

1

0

1

Clust 7

0

1

0

0

0

1

0

0

0

0

1

1

0

1

  1. Here, aa mutations with frequencies exceeding 50% are listed in genomic order
  2. *The first row depicts mutations characteristic for B.1.1.7 according to the lineage report [37]