Machine learning and statistics shape a novel path in archaeal promoter annotation

BMC Bioinformatics

Table 1 Flagships of archaeal classification based on statistics

	Promoters	Standard deviation	Blocks	Downstream	Shuffled
H. volcanii	− 8.36	± 1.15	− 11.66	− 11.44	− 10.66
S. solfataricus	− 6.72	± 0.85	− 8.87	− 8.58	− 8.73
T. kodakarensis	− 7.13	± 0.93	− 10.16	− 10.07	− 9.28

The results displayed in Table 1 have information on the averaged values of the region encompassing TBP and TFB (BRE extremity) for four datasets: (i) experimentally verified promoters; (ii) control done in blocks; (iii) downstream sequences as control and; (iv) control with shuffled sequences. The standard deviation for the average of the promoters is also provided

ISSN: 1471-2105