From: BEXCIS: Bayesian methods for estimating the degree of the skewness of X chromosome inactivation
SNP | Position | Allele | MAF | P value | Trait | Gene | ||||
---|---|---|---|---|---|---|---|---|---|---|
Minor | Major | HWE test | D-INT | I-INT | O-INT | |||||
rs12557060 | 28772570 | G | A | 0.4737 | 0.1781 | \(3.883\times 10^{-6}\) | \(4.087\times 10^{-3}\) | \(7.759\times 10^{-6}\) | BD | \(IL1RAPL1^a\) |
rs331318 | 32234387 | G | A | 0.4847 | 0.6868 | \(5.163\times 10^{-7}\) | \(7.768\times 10^{-4}\) | \(1.032\times 10^{-6}\) | DEP | \(DMD^b\) |
rs5928558 | 34363004 | G | A | 0.1844 | 0.0529 | \(4.225\times 10^{-6}\) | \(8.921\times 10^{-5}\) | \(8.069\times 10^{-6}\) | DEP | Â |
rs10522027 | 34558201 | A | G | 0.1405 | 0.1642 | \(1.490\times 10^{-8}\) | \(3.094\times 10^{-6}\) | \(2.967\times 10^{-8}\) | DEP | \(TMEM47^c\) |
rs3008896 | 39632138 | A | G | 0.4654 | 0.7873 | \(3.474\times 10^{-6}\) | \(4.060\times 10^{-3}\) | \(6.942\times 10^{-6}\) | BD | Â |
rs4240042 | 39748679 | G | A | 0.3953 | 0.9627 | \(1.208\times 10^{-6}\) | \(1.352\times 10^{-3}\) | \(2.414\times 10^{-6}\) | CON | Â |
rs5961051 | 53906442 | C | A | 0.4216 | 0.0810 | \(3.541\times 10^{-6}\) | \(4.563\times 10^{-3}\) | \(7.077\times 10^{-6}\) | BD | Â |
rs4489437 | 124515139 | G | A | 0.4481 | 0.9639 | \(2.140\times 10^{-7}\) | \(5.599\times 10^{-4}\) | \(4.277\times 10^{-7}\) | BD | Â |
rs2097322 | 124523716 | A | C | 0.4020 | 0.6416 | \(2.369\times 10^{-6}\) | \(2.042\times 10^{-3}\) | \(4.732\times 10^{-6}\) | BD | Â |
rs463233 | 149839444 | G | A | 0.4800 | 0.5601 | \(4.164\times 10^{-6}\) | \(5.817\times 10^{-3}\) | \(8.321\times 10^{-6}\) | BD | Â |
rs12849233 | 150564832 | A | C | 0.3296 | 0.7611 | \(1.360\times 10^{-7}\) | \(2.196\times 10^{-4}\) | \(2.718\times 10^{-7}\) | DEP | \(PASD1^d\) |