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Fig. 2 | BMC Bioinformatics

Fig. 2

From: FragGeneScanRs: faster gene prediction for short reads

Fig. 2

Scaling for multithreaded execution of FGS, FGS+ and FGSrs on long reads (1328 bp), computed as the speedup of concurrent execution with t threads (x-axis) over single threaded execution. Dash line shows the theoretical upper bound for the speedup. Race conditions consistently halt the execution of FGS+ above 10 threads. FGS and FGSrs generate DNA sequences, protein translations and metadata, whereas FGS+ only generates protein translations because the software crashes when other output is generated. FGS and FGS+ report gene predictions out-of-order, where default in-order reporting was used for FGSrs

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