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Table 1 Average execution time and standard deviation for various read lengths

From: FragGeneScanRs: faster gene prediction for short reads

Average read length FGS Mean [s] FGS+ Mean [s] FGSrs Mean [s]
100 4.843 ± 0.018 0.491 ± 0.002 0.396 ± 0.004
200 5.966 ± 0.028 0.842 ± 0.001 0.748 ± 0.002
300 7.020 ± 0.011 1.168 ± 0.001 1.103 ± 0.012
400 8.073 ± 0.020 1.487 ± 0.002 1.451 ± 0.002
500 9.109 ± 0.016 1.803 ± 0.004 1.795 ± 0.002
600 10.122 ± 0.021 2.115 ± 0.002 2.154 ± 0.015
700 11.137 ± 0.026 2.448 ± 0.007 2.505 ± 0.008
800 12.196 ± 0.020 2.790 ± 0.005 2.859 ± 0.010
900 13.218 ± 0.023 3.132 ± 0.003 3.198 ± 0.010
1000 14.309 ± 0.255 3.474 ± 0.018 3.547 ± 0.005
2000 24.443 ± 0.025 7.021 ± 0.020 7.052 ± 0.024
3000 34.655 ± 0.038 10.913 ± 0.014 10.545 ± 0.025
4000 45.037 ± 0.051 14.841 ± 0.020 14.042 ± 0.022
5000 55.315 ± 0.059 18.756 ± 0.034 17.525 ± 0.039
6000 65.537 ± 0.118 22.997 ± 0.298 21.007 ± 0.028
7000 75.791 ± 0.058 27.099 ± 0.080 24.521 ± 0.068
8000 86.172 ± 0.202 31.440 ± 0.051 27.980 ± 0.043
9000 96.354 ± 0.347 35.858 ± 0.040 31.489 ± 0.055
10,000 106.509 ± 0.104 40.513 ± 0.071 34.962 ± 0.050