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Fig. 6 | BMC Bioinformatics

Fig. 6

From: rprimer: an R/bioconductor package for design of degenerate oligos for sequence variable viruses

Fig. 6

Evaluation of rprimer package performance. The violin plots show the time required to perform each step of the oligo design process in assay A and B, on a generic workplace laptop using a multiple DNA sequence alignment of 128 norovirus GI sequences. The checkMatch function was run with all oligo candidates (A, n = 184, B, n = 128) towards 128 target sequences. Each step was repeated 20 times

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