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Fig. 1 | BMC Bioinformatics

Fig. 1

From: DriverRWH: discovering cancer driver genes by random walk on a gene mutation hypergraph

Fig. 1

Overview of DriverRWH. A, B Construction of the weighted hypergraph model using somatic mutation profiles of a given cancer type and a PPI network. Each sample is indicated with colored circular area (hyperedge) which contains all the mutated genes (vertices) of individual. Since the number of mutated gene varies from samples, the hypergraph contains different number of vertices. The weights of vertices in each hyperedge are assigned according to the degree in the context of the background subnetwork. C Illustration of the random walk process on the hypergraph. For vertex \(u\), we randomly select a hyperedge which incident with \(u\) and then selects a node according the weights of vertices in selected hyperedge as the destination vertex \(v\) to shift

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